Optimal Transport

Diffusion Earth Mover's Distance and Distribution Embeddings
A fast diffusion-based earth mover’s distance
Alex Tong, Guillaume Huguet, Amine Natik, Kincaid MacDonald, Manik Kuchroo, Ronald Coifman, Guy Wolf, Smita Krishnaswamy
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Diffusion Earth Mover's Distance and Distribution Embeddings
TrajectoryNet: A Dynamic Optimal Transport Network for Modeling Cellular Dynamics
A Combination of Continuous Normalizing Flows and Dynamic Optimal Transport to model the dynamics of cells.
Alex Tong, Jessie Huang, Guy Wolf, David Van Dijk, Smita Krishnaswamy
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TrajectoryNet: A Dynamic Optimal Transport Network for Modeling Cellular Dynamics