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MURAL: An Unsupervised Random Forest-Based Embedding for Electronic Health Record Data
A unsupervised random tree distance for missing data in EHR
Michal Gerasimiuk, Dennis L. Shung, Alex Tong, Adrian J. Stanley, Machael Shultz, Jeffrey Ngu, Loren Laine, Guy Wolf, Smita Krishnaswamy
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Diffusion Earth Mover's Distance and Distribution Embeddings
A fast diffusion-based earth mover’s distance
Alex Tong, Guillaume Huguet, Amine Natik, Kincaid MacDonald, Manik Kuchroo, Ronald Coifman, Guy Wolf, Smita Krishnaswamy
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Diffusion Earth Mover's Distance and Distribution Embeddings
TrajectoryNet: A Dynamic Optimal Transport Network for Modeling Cellular Dynamics
A Combination of Continuous Normalizing Flows and Dynamic Optimal Transport to model the dynamics of cells.
Alex Tong, Jessie Huang, Guy Wolf, David Van Dijk, Smita Krishnaswamy
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TrajectoryNet: A Dynamic Optimal Transport Network for Modeling Cellular Dynamics